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Adding mgi fastq demultipexing via mgikit #292

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wants to merge 6 commits into from
Closed

Adding mgi fastq demultipexing via mgikit #292

wants to merge 6 commits into from
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ziadbkh
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@ziadbkh ziadbkh commented Nov 28, 2024

Closes #184

PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
  • If necessary, also make a PR on the nf-core/demultiplex branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core pipelines lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

@ziadbkh ziadbkh requested review from nh13, sam-white04, blajoie and a team as code owners November 28, 2024 23:12
@ziadbkh ziadbkh requested review from Aratz and removed request for a team November 28, 2024 23:12
@ziadbkh ziadbkh changed the title Adding mgi fasta demultipexing via mgikit Adding mgi fastq demultipexing via mgikit Nov 28, 2024
@ziadbkh ziadbkh closed this Dec 6, 2024
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@nh13 nh13 Awaiting requested review from nh13 nh13 is a code owner

@sam-white04 sam-white04 Awaiting requested review from sam-white04 sam-white04 is a code owner

@blajoie blajoie Awaiting requested review from blajoie blajoie is a code owner

@Aratz Aratz Awaiting requested review from Aratz Aratz is a code owner automatically assigned from nf-core/demultiplex

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@ziadbkh