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[Reworked #202] Add simple git functions to test contract behaviour #203

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[Reworked #202] Add simple git functions to test contract behaviour #203

wants to merge 58 commits into from

Commits on Sep 12, 2023

  1. fix #182 

    - rename FileSystemTree.filter -> FileSystemTree.filterFiles
- add FileSystemTree.filter that also applies predicate to folder names
- add tests that show difference when filtering for names starting with '.'
    @kMutagene
    kMutagene committed Sep 12, 2023
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  2. Merge pull request #186 from nfdi4plants/fix-#182 

    fix #182
    @HLWeil
    HLWeil authored Sep 12, 2023
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  3. implement #188 

    - Add FileSystemTree.FilterFolders
- FileSystemTree.FilterFiles now only filters files (returns empty folders instead of removing them)
- fix some static member bindings
- Add tests for FilterFolders
- Tests now test both instance and static methods
    @kMutagene
    kMutagene committed Sep 12, 2023
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  4. implement #187 

    -Add `GetRegisteredPayload` and `GetAdditionalPayload`

- Add tests
    @kMutagene
    kMutagene committed Sep 12, 2023
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  5. fix GetRegisteredPayload cell conversion failure 

    - iterate through all tables instead of the first only
- use ToFreeTextCell(), which is a proper conversion instead of AsFreeTextCell which is a match that can fail
    @kMutagene
    kMutagene committed Sep 12, 2023
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Commits on Sep 13, 2023

  1. Use path literals for payload path filtering

    @kMutagene
    kMutagene committed Sep 13, 2023
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Commits on Sep 14, 2023

  1. Merge pull request #189 from nfdi4plants/implement-#187 

    FileSystemTree additions and Payload detection
    @HLWeil
    HLWeil authored Sep 14, 2023
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Commits on Sep 18, 2023

  1. Update ArcTypes to ref parent 🚧

    @Freymaurer @HLWeil
    Freymaurer authored and HLWeil committed Sep 18, 2023
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  2. Work on update 🚧

    @Freymaurer @HLWeil
    Freymaurer authored and HLWeil committed Sep 18, 2023
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  3. isa and isa.json tests pass ✔️

    @Freymaurer @HLWeil
    Freymaurer authored and HLWeil committed Sep 18, 2023
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  4. Add ArcStudy assay handling tests ✅

    @Freymaurer @HLWeil
    Freymaurer authored and HLWeil committed Sep 18, 2023
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  5. Add more tests ✅

    @Freymaurer @HLWeil
    Freymaurer authored and HLWeil committed Sep 18, 2023
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  6. add registered studies to investigation

    @HLWeil
    HLWeil committed Sep 18, 2023
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  7. Rename study.assay api and fix tests

    @Freymaurer @HLWeil
    Freymaurer authored and HLWeil committed Sep 18, 2023
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  8. fix and improve ISA Spreadsheet tests for assay/study registration

    @HLWeil
    HLWeil committed Sep 18, 2023
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  9. start adding update functions

    @HLWeil
    HLWeil committed Sep 18, 2023
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  10. Work on UpdateBy on assay,study,investigation 🚧

    @Freymaurer @HLWeil
    Freymaurer authored and HLWeil committed Sep 18, 2023
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  11. finish up first version of updated arc read in

    @HLWeil
    HLWeil committed Sep 18, 2023
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  12. add helper functions

    @HLWeil
    HLWeil committed Sep 18, 2023
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  13. add table updating tests and fix underlying functions

    @HLWeil
    HLWeil committed Sep 18, 2023
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  14. fix spreadsheet reader parsing empty ontology annotations

    @HLWeil
    HLWeil committed Sep 18, 2023
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  15. test and fix arc read in with updating of objects against each other

    @HLWeil
    HLWeil committed Sep 18, 2023
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  16. some comments and small adjustments

    @HLWeil
    HLWeil committed Sep 18, 2023
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  17. fix merge inconsistencies

    @HLWeil
    HLWeil committed Sep 18, 2023
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  18. Merge pull request #184 from nfdi4plants/developer_TopLevelAssays 

    ArcInvestigation level assays
    @HLWeil
    HLWeil authored Sep 18, 2023
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  19. Add ARCtrl tests to runTests target 🐛

    @Freymaurer
    Freymaurer committed Sep 18, 2023
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  20. Add SemVer logic ✅

    @Freymaurer
    Freymaurer committed Sep 18, 2023
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  21. Add templates+json+tests ✨✅

    @Freymaurer
    Freymaurer committed Sep 18, 2023
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  22. Apply changes according to PR-review #191

    @Freymaurer
    Freymaurer committed Sep 18, 2023
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  23. Change json-format to write ProcessSequence instead of ArcTable

    @Freymaurer
    Freymaurer committed Sep 18, 2023
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Commits on Sep 19, 2023

  1. Add js arctrl tests to CI

    @Freymaurer
    Freymaurer committed Sep 19, 2023
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  2. Make tests pass

    @Freymaurer
    Freymaurer committed Sep 19, 2023
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  3. fix protocol REF appearing after ArcTable to process roundabout conve… 

    …rsion
    @HLWeil
    HLWeil committed Sep 19, 2023
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  4. Add template equality + tests

    @Freymaurer
    Freymaurer committed Sep 19, 2023
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  5. Improve robustness of runTests logic ✨

    @Freymaurer
    Freymaurer committed Sep 19, 2023
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  6. Update StructuralEquals naming

    @Freymaurer
    Freymaurer committed Sep 19, 2023
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  7. Merge pull request #191 from nfdi4plants/developer_TemplatesJson 

    Developer templates json
    @Freymaurer
    Freymaurer authored Sep 19, 2023
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Commits on Sep 20, 2023

  1. fix and test metadatasheet reader interpreting empty strings

    @HLWeil
    HLWeil committed Sep 20, 2023
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  2. fix and test table updating failing for specific tables

    @HLWeil
    HLWeil committed Sep 20, 2023
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  3. Merge pull request #192 from nfdi4plants/fixes 

    Fixes
    @Freymaurer
    Freymaurer authored Sep 20, 2023
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  4. restructure testing environment

    @HLWeil
    HLWeil committed Sep 20, 2023
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  5. unified mocha and expecto functionality into TestingUtils project

    @HLWeil
    HLWeil committed Sep 20, 2023
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  6. Merge pull request #194 from nfdi4plants/developer_testRestructure 

    Restructure testing environment
    @Freymaurer
    Freymaurer authored Sep 20, 2023
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  7. bump to 1.0.0-alpha5

    @HLWeil
    HLWeil committed Sep 20, 2023
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  8. add test and fix for empty ArcTable process conversion 

    #193
    @HLWeil
    HLWeil committed Sep 20, 2023
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  9. Merge pull request #199 from nfdi4plants/developer_templates 

    Developer templates
    @Freymaurer
    Freymaurer authored Sep 20, 2023
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  10. Improve UpdateHeader forceConvert flag 🐛#198

    @Freymaurer
    Freymaurer committed Sep 20, 2023
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  11. cleanup unnecessary testfiles

    @HLWeil
    HLWeil committed Sep 20, 2023
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  12. add template xlsx parsing

    @HLWeil
    HLWeil committed Sep 20, 2023
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Commits on Sep 21, 2023

  1. Work on #197 🚧

    @Freymaurer
    Freymaurer committed Sep 21, 2023
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  2. Add GetContent() for CompositeCell #190

    @Freymaurer
    Freymaurer committed Sep 21, 2023
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  3. Add tests for CompositeCell.GetContent ✅

    @Freymaurer
    Freymaurer committed Sep 21, 2023
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  4. Add CompositeHeader js helpers #197

    @Freymaurer
    Freymaurer committed Sep 21, 2023
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  5. Add native js test ✅

    @Freymaurer
    Freymaurer committed Sep 21, 2023
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  6. Merge pull request #200 from nfdi4plants/developer_Issues 

    Solve Issues
    @Freymaurer
    Freymaurer authored Sep 21, 2023
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  7. test and fix template spreadsheet parsing

    @HLWeil
    HLWeil committed Sep 21, 2023
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  8. add and fix full template xlsx file parsing

    @HLWeil
    HLWeil committed Sep 21, 2023
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  9. Merge pull request #201 from nfdi4plants/developer_templates 

    Template spreadsheet parsers
    @HLWeil
    HLWeil authored Sep 21, 2023
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