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update abPOA

update abPOA #671

on: [ push ]
name: build and test
jobs:
build_and_test:
runs-on: ubuntu-20.04
steps:
- uses: actions/checkout@v2
- name: Install required packages
run: sudo apt-get update && sudo apt-get install -y
git
bash
cmake
make
g++
python3-dev
libatomic-ops-dev
gcc-multilib
autoconf
libgsl-dev
zlib1g-dev
libzstd-dev
libjemalloc-dev
- name: Init and update submodules
run: git submodule update --init --recursive
- name: Build smoothxg
run: cmake -H. -DCMAKE_BUILD_TYPE=Debug -Bbuild && cmake --build build -- -j 2
- name: Run tests
run: ctest --test-dir build -E odgi-test --verbose