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Merge pull request #98 from jchorl/jchorl/endswith Python application #41: Commit 6069135 pushed by kbessonov1984
January 22, 2025 19:13 5m 41s master
master
January 22, 2025 19:13 5m 41s
change gz check to check suffix of path Python application #40: Pull request #98 synchronize by kbessonov1984
January 22, 2025 19:00 5m 26s jchorl:jchorl/endswith
jchorl:jchorl/endswith
January 22, 2025 19:00 5m 26s
release v2.0.0 compatible with biopython version 1.85 now Python application #39: Commit 600687c pushed by kbessonov1984
January 22, 2025 18:44 5m 11s master
master
January 22, 2025 18:44 5m 11s
release v2.0.0 with biopython less than v1.85 directive Python application #38: Commit 0ce6ef3 pushed by kbessonov1984
January 22, 2025 17:56 5m 55s master
master
January 22, 2025 17:56 5m 55s
change gz check to check suffix of path Python application #37: Pull request #98 synchronize by jchorl
January 21, 2025 17:06 3m 52s jchorl:jchorl/endswith
jchorl:jchorl/endswith
January 21, 2025 17:06 3m 52s
Merge pull request #94 from phac-nml/v2.0.0 Python application #34: Commit 21f2cbd pushed by kbessonov1984
December 12, 2024 12:17 5m 43s master
master
December 12, 2024 12:17 5m 43s
Release V2.0.0 Python application #33: Pull request #94 synchronize by kbessonov1984
December 12, 2024 12:00 6m 21s v2.0.0
v2.0.0
December 12, 2024 12:00 6m 21s
Merge branch 'master' into v2.0.0 Python application #32: Commit 33dd165 pushed by kbessonov1984
December 12, 2024 12:00 5m 43s v2.0.0
v2.0.0
December 12, 2024 12:00 5m 43s
updated README.md Python application #31: Commit 9277821 pushed by kbessonov1984
December 12, 2024 11:54 6m 1s v2.0.0
v2.0.0
December 12, 2024 11:54 6m 1s
release v2.0.0 Python application #30: Commit 9cd8494 pushed by kbessonov1984
December 12, 2024 11:23 7m 5s v2.0.0
v2.0.0
December 12, 2024 11:23 7m 5s
--longreads option added for FASTQ long reads inputs such as PacBio, … Python application #29: Commit f1f6707 pushed by kbessonov1984
November 7, 2024 23:07 5m 11s v2.0.0
v2.0.0
November 7, 2024 23:07 5m 11s
--longreads option added for FASTQ long reads inputs such as PacBio, … Python application #28: Commit ea75384 pushed by kbessonov1984
November 7, 2024 23:06 5m 22s v2.0.0
v2.0.0
November 7, 2024 23:06 5m 22s
--longreads option added for FASTQ long reads inputs such as PacBio, … Python application #27: Commit 3963d92 pushed by kbessonov1984
November 7, 2024 23:04 5m 50s v2.0.0
v2.0.0
November 7, 2024 23:04 5m 50s
sorted for O mixed antigen is working Python application #26: Commit 6e38b40 pushed by kbessonov1984
November 7, 2024 22:15 5m 10s v2.0.0
v2.0.0
November 7, 2024 22:15 5m 10s
Updated bowtie2 setting to be compatible with long reads Python application #25: Commit c203a3b pushed by kbessonov1984
November 7, 2024 21:30 5m 25s v2.0.0
v2.0.0
November 7, 2024 21:30 5m 25s
added Shigella_sonnei test sample Python application #24: Commit ee4db4e pushed by kbessonov1984
October 28, 2024 19:33 5m 58s v2.0.0
v2.0.0
October 28, 2024 19:33 5m 58s
added new species ID fields that provide info on species hashes to re… Python application #23: Commit b2c7c5c pushed by kbessonov1984
October 28, 2024 19:26 5m 17s v2.0.0
v2.0.0
October 28, 2024 19:26 5m 17s
Added test of no directory specified and testing for multiple files i… Python application #22: Commit 7481376 pushed by kbessonov1984
October 3, 2024 21:04 5m 34s v2.0.0
v2.0.0
October 3, 2024 21:04 5m 34s
Updated pathotyping and toxin typing database by adding protein seque… Python application #21: Commit 02bc7c7 pushed by kbessonov1984
October 3, 2024 17:10 10m 4s v2.0.0
v2.0.0
October 3, 2024 17:10 10m 4s
Updated pathotyping and toxin typing database by adding protein seque… Python application #20: Commit 776c2fb pushed by kbessonov1984
October 3, 2024 17:00 4m 58s v2.0.0
v2.0.0
October 3, 2024 17:00 4m 58s
updated stx database STX subunit A and B sequences. Only kept STX com… Python application #19: Commit b420a54 pushed by kbessonov1984
September 20, 2024 17:19 4m 50s v2.0.0
v2.0.0
September 20, 2024 17:19 4m 50s
Updated documentation on Shiga toxin and pathotyping, also fixed bug … Python application #18: Commit 5f2c847 pushed by kbessonov1984
September 18, 2024 21:04 5m 12s v2.0.0
v2.0.0
September 18, 2024 21:04 5m 12s
Updated README.md with species ID module description Python application #17: Commit fe0de54 pushed by kbessonov1984
September 18, 2024 16:13 4m 51s v2.0.0
v2.0.0
September 18, 2024 16:13 4m 51s
Updated README.md to follow DAAD format and also updated url to Speci… Python application #16: Commit 1d3ba78 pushed by kbessonov1984
September 12, 2024 20:16 4m 54s v2.0.0
v2.0.0
September 12, 2024 20:16 4m 54s
Fixed bugs related to batch mode output files displaying only last sa… Python application #15: Commit d70a025 pushed by kbessonov1984
August 1, 2024 15:48 4m 42s v2.0.0
v2.0.0
August 1, 2024 15:48 4m 42s