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Clear up DelftBlue tutorial #359

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May 24, 2024
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Clear up DelftBlue tutorial #359

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Clear up DelftBlue tutorial
EwoutH May 23, 2024
41c71b6
MPI tutorial: pip upgrade existing EMAworkbench installation
EwoutH May 24, 2024
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8 changes: 4 additions & 4 deletions docs/source/indepth_tutorial/mpi-evaluator.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -283,9 +283,9 @@
"module load py-mpi4py\n",
"module load py-pip\n",
"\n",
"pip install --user ema_workbench\n",
"pip install --user --upgrade ema_workbench\n",
"\n",
"mpiexec -n 1 python3 example_mpi_lake_model.py\n",
"mpiexec -n 1 python3 ema_example_model.py\n",
"```\n",
"\n",
"Modify the script to suit your needs:\n",
Expand Down Expand Up @@ -340,13 +340,13 @@
"\n",
"Create a new directory for this tutorial, for example `mkdir ema_mpi_test` and then `cd ema_mpi_test`\n",
"\n",
"Then, you want to send your Python file and SLURM script to DelftBlue. Open a **new** command line terminal, and then you can do this with `scp`:\n",
"Then, you want to send your Python file and SLURM script to DelftBlue. Make sure your files are all in one folder. Open a **new** command line terminal, `cd` in the folder where your files are, and then send the files with `scp`:\n",
"\n",
"```bash\n",
"scp -J <netid>@student-linux.tudelft.nl ema_example_model.py slurm_script.sh <netid>@login.delftblue.tudelft.nl:/scratch/<netid>/ema_mpi_test\n",
"```\n",
"\n",
"Before scheduling the SLURM script, we first have to make it executable:\n",
"Now go back to your original cmd window, on which you logged in on DelftBlue. Before scheduling the SLURM script, we first have to make it executable:\n",
"\n",
"```bash\n",
"chmod +x slurm_script.sh\n",
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