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Supercedes #26, but doesn't work yet. I think that shapely doesn't support cross-compilation because of the way that it detects numpy as a dependency.
shapely depends on libgeos, and what this does is adds a separate step that builds libgeos and installs it into the sysroot (but only with static linking), so in theory if the wheel gets built it should just work. However it fails when trying to link to some numpy stuff.
I've brought this as far as I want to go with it, someone else will need to fix shapely.