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Y24-271 - LCM Triomics Configuration + Integration Suite Tests #4305

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Y24-271 - LCM Triomics Configuration + Integration Suite Tests #4305

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ccb996b
Added plate purposes for LCM Triomics EMSeq steps
SHIV5T3R Aug 28, 2024
51827bc
Added request types for LCM Triomics DNA Library Prep
SHIV5T3R Aug 28, 2024
6c58358
Added LCMT to product catalogue
SHIV5T3R Aug 28, 2024
c379162
Added submission template for LCMT pipeline entry
SHIV5T3R Aug 28, 2024
15fb703
Removed adp lig from plate purposes
SHIV5T3R Aug 28, 2024
826b90e
Removed redundant request types
SHIV5T3R Aug 28, 2024
49c59a0
Modified submission template
SHIV5T3R Aug 28, 2024
b42e6cb
Prettier
SHIV5T3R Aug 28, 2024
b2b55e1
Changed product name for LCM Triomics
SHIV5T3R Sep 4, 2024
8286a2c
Changed product catalogue name in submission template
SHIV5T3R Sep 4, 2024
e7e351d
Modified request type key to match
SHIV5T3R Sep 4, 2024
1949732
Modified product line name
SHIV5T3R Sep 4, 2024
4c6d4f8
Request class changed to standard library request
SHIV5T3R Sep 4, 2024
bf18eb2
Added library types to LCM Triomics request
SHIV5T3R Sep 4, 2024
668db70
Modified comment descriptors related to pipeline name
SHIV5T3R Sep 4, 2024
e239a2a
Added "EMSeq" to request type name
SHIV5T3R Sep 6, 2024
59bcfc6
Removed "DNA" term from comments
SHIV5T3R Sep 6, 2024
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6 changes: 6 additions & 0 deletions config/default_records/plate_purposes/013_lcm_triomics_plate_purposes.wip.yml
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Original file line number Diff line number Diff line change
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# Plate purposes for LCM Triomics WGS and EMSeq
---
LCMT Lysate:
type: PlatePurpose::Input
stock_plate: true
cherrypickable_target: false
3 changes: 3 additions & 0 deletions config/default_records/product_catalogues/013_lcm_triomics_catalogue.wip.yml
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Original file line number Diff line number Diff line change
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---
LCM Triomics WGS and EMSeq:
selection_behaviour: SingleProduct
14 changes: 14 additions & 0 deletions config/default_records/request_types/018_limber_lcm_triomics_request_types.wip.yml
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Original file line number Diff line number Diff line change
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# Request types for LCM Triomics WGS and EMSeq
---
limber_lcm_triomics_emseq:
name: LCM Triomics EMSeq
asset_type: Well
order: 1
request_class_name: IlluminaHtp::Requests::StdLibraryRequest
for_multiplexing: false
billable: true
product_line_name: Short Read
acceptable_purposes:
- LCMT Lysate
library_types:
- LCM Triomics EMSeq
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9 changes: 9 additions & 0 deletions config/default_records/submission_templates/014_lcm_triomics_submission_templates.wip.yml
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# Submission templates for LCM Triomics WGS and EMSeq
---
# LCM Triomics EMSeq submission template
Limber-Htp - LCM Triomics EMSeq:
submission_class_name: "LinearSubmission"
related_records:
request_type_keys: ["limber_lcm_triomics_emseq"]
product_line_name: LCM Triomics WGS and EMSeq
product_catalogue_name: LCM Triomics WGS and EMSeq
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