Releases: sigven/pcgr
Releases · sigven/pcgr
v2.1.2
v2.1.1
v2.1.0
v2.0.3
v2.0.2
v2.0.1
v2.0.0
- Details in CHANGELOG
- Massive reference data bundle upgrade, new report layout, oncogenicity classification++
- Support for Singularity/Apptainer
- Major data/software updates:
- Ensembl VEP
v112 - ClinVar (2024-06)
- CIViC (2024-06-21)
- GENCODE
v46/v19(GRCh38/GRCh37) - CancerMine
v50(2023-03) - UniProt KB
v2024_03
- Ensembl VEP
v1.4.1
What's Changed
- skip favicon for Rmarkdown by @sigven in #210
- Use biocondarised vcf2tsvpy by @pdiakumis in #211
Full Changelog: v1.4.0...v1.4.1
Contributors
sigven and pdiakumis
Assets 2
v1.4.0
What's Changed
- Pick trans consequence patch by @sigven in #206
- Use VEP vcf as input to vcf2maf.pl by @sigven in #207
- Better handling of pcgr/pcgrr conda env custom naming by @pdiakumis in #208
- Update report style by @sigven in #209
Full Changelog: v1.3.0...v1.4.0
Contributors
sigven and pdiakumis