Multi-stage programming model with K-means, EM, LinearReg, and LogisticReg

bin/run.sh

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+#!/bin/sh
+#
+# Licensed to the Apache Software Foundation (ASF) under one
+# or more contributor license agreements.  See the NOTICE file
+# distributed with this work for additional information
+# regarding copyright ownership.  The ASF licenses this file
+# to you under the Apache License, Version 2.0 (the
+# "License"); you may not use this file except in compliance
+# with the License.  You may obtain a copy of the License at
+#
+#   http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing,
+# software distributed under the License is distributed on an
+# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+# KIND, either express or implied.  See the License for the
+# specific language governing permissions and limitations
+# under the License.
+#
+
+# EXAMPLE USAGE 
+# ./run.sh -local true -split 4 -input sample
+
+# RUNTIME
+SELF_JAR=../target/flexion-0.1-SNAPSHOT-shaded.jar
+
+LOGGING_CONFIG='-Djava.util.logging.config.class=org.apache.reef.util.logging.Config'
+
+CLASSPATH=$YARN_HOME/share/hadoop/common/*:$YARN_HOME/share/hadoop/common/lib/*:$YARN_HOME/share/hadoop/yarn/*:$YARN_HOME/share/hadoop/hdfs/*:$YARN_HOME/share/hadoop/mapreduce/lib/*:$YARN_HOME/share/hadoop/mapreduce/*
+
+YARN_CONF_DIR=$YARN_HOME/etc/hadoop
+
+ALG=edu.snu.reef.flexion.examples.simple.SimpleREEF
+
+CMD="java -cp $YARN_CONF_DIR:$SELF_JAR:$CLASSPATH $LOCAL_RUNTIME_TMP $LOGGING_CONFIG $ALG $*"
+echo $CMD
+$CMD # 2> /dev/null

bin/run_em.sh

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+#!/bin/sh
+#
+# Licensed to the Apache Software Foundation (ASF) under one
+# or more contributor license agreements.  See the NOTICE file
+# distributed with this work for additional information
+# regarding copyright ownership.  The ASF licenses this file
+# to you under the Apache License, Version 2.0 (the
+# "License"); you may not use this file except in compliance
+# with the License.  You may obtain a copy of the License at
+#
+#   http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing,
+# software distributed under the License is distributed on an
+# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+# KIND, either express or implied.  See the License for the
+# specific language governing permissions and limitations
+# under the License.
+#
+# EXAMPLE USAGE 
+# ./run_em.sh -numCls 4 -convThr 0.01 -maxIter 20 -local true -split 4 -input sample_cluster
+
+# RUNTIME
+SELF_JAR=../target/flexion-0.1-SNAPSHOT-shaded.jar
+
+LOGGING_CONFIG='-Djava.util.logging.config.class=org.apache.reef.util.logging.Config'
+
+CLASSPATH=$YARN_HOME/share/hadoop/common/*:$YARN_HOME/share/hadoop/common/lib/*:$YARN_HOME/share/hadoop/yarn/*:$YARN_HOME/share/hadoop/hdfs/*:$YARN_HOME/share/hadoop/mapreduce/lib/*:$YARN_HOME/share/hadoop/mapreduce/*
+
+YARN_CONF_DIR=$YARN_HOME/etc/hadoop
+
+EM=edu.snu.reef.flexion.examples.ml.algorithms.clustering.em.EMREEF
+
+CMD="java -cp $YARN_CONF_DIR:$SELF_JAR:$CLASSPATH $LOCAL_RUNTIME_TMP $LOGGING_CONFIG $EM $*"
+echo $CMD
+$CMD # 2> /dev/null

bin/run_kmeans.sh

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+#!/bin/sh
+#
+# Licensed to the Apache Software Foundation (ASF) under one
+# or more contributor license agreements.  See the NOTICE file
+# distributed with this work for additional information
+# regarding copyright ownership.  The ASF licenses this file
+# to you under the Apache License, Version 2.0 (the
+# "License"); you may not use this file except in compliance
+# with the License.  You may obtain a copy of the License at
+#
+#   http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing,
+# software distributed under the License is distributed on an
+# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+# KIND, either express or implied.  See the License for the
+# specific language governing permissions and limitations
+# under the License.
+#
+
+# EXAMPLE USAGE 
+# ./run_kmeans.sh -numCls 4 -convThr 0.01 -maxIter 20 -local true -split 4 -input sample_cluster
+
+# RUNTIME
+SELF_JAR=../target/flexion-0.1-SNAPSHOT-shaded.jar
+
+LOGGING_CONFIG='-Djava.util.logging.config.class=org.apache.reef.util.logging.Config'
+
+CLASSPATH=$YARN_HOME/share/hadoop/common/*:$YARN_HOME/share/hadoop/common/lib/*:$YARN_HOME/share/hadoop/yarn/*:$YARN_HOME/share/hadoop/hdfs/*:$YARN_HOME/share/hadoop/mapreduce/lib/*:$YARN_HOME/share/hadoop/mapreduce/*
+
+YARN_CONF_DIR=$YARN_HOME/etc/hadoop
+
+ALG=edu.snu.reef.flexion.examples.ml.algorithms.clustering.kmeans.KMeansREEF
+
+CMD="java -cp $YARN_CONF_DIR:$SELF_JAR:$CLASSPATH $LOCAL_RUNTIME_TMP $LOGGING_CONFIG $ALG $*"
+echo $CMD
+$CMD # 2> /dev/null

bin/run_logistic.sh

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+#!/bin/sh
+#
+# Licensed to the Apache Software Foundation (ASF) under one
+# or more contributor license agreements.  See the NOTICE file
+# distributed with this work for additional information
+# regarding copyright ownership.  The ASF licenses this file
+# to you under the Apache License, Version 2.0 (the
+# "License"); you may not use this file except in compliance
+# with the License.  You may obtain a copy of the License at
+#
+#   http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing,
+# software distributed under the License is distributed on an
+# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+# KIND, either express or implied.  See the License for the
+# specific language governing permissions and limitations
+# under the License.
+#
+
+# EXAMPLE USAGE 
+# ./run_logistic.sh -dim 3 -maxIter 20 -stepSize 0.00001 -lambda 0.1 -local true -split 4 -input sample_classification
+
+# RUNTIME
+SELF_JAR=../target/flexion-0.1-SNAPSHOT-shaded.jar
+
+LOGGING_CONFIG='-Djava.util.logging.config.class=org.apache.reef.util.logging.Config'
+
+CLASSPATH=$YARN_HOME/share/hadoop/common/*:$YARN_HOME/share/hadoop/common/lib/*:$YARN_HOME/share/hadoop/yarn/*:$YARN_HOME/share/hadoop/hdfs/*:$YARN_HOME/share/hadoop/mapreduce/lib/*:$YARN_HOME/share/hadoop/mapreduce/*
+
+YARN_CONF_DIR=$YARN_HOME/etc/hadoop
+
+ALG=edu.snu.reef.flexion.examples.ml.algorithms.classification.LogisticRegREEF
+
+CMD="java -cp $YARN_CONF_DIR:$SELF_JAR:$CLASSPATH $LOCAL_RUNTIME_TMP $LOGGING_CONFIG $ALG $*"
+echo $CMD
+$CMD # 2> /dev/null

bin/run_regression.sh

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+#!/bin/sh
+#
+# Licensed to the Apache Software Foundation (ASF) under one
+# or more contributor license agreements.  See the NOTICE file
+# distributed with this work for additional information
+# regarding copyright ownership.  The ASF licenses this file
+# to you under the Apache License, Version 2.0 (the
+# "License"); you may not use this file except in compliance
+# with the License.  You may obtain a copy of the License at
+#
+#   http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing,
+# software distributed under the License is distributed on an
+# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+# KIND, either express or implied.  See the License for the
+# specific language governing permissions and limitations
+# under the License.
+#
+
+# EXAMPLE USAGE 
+# ./run_regression.sh -dim 3 -maxIter 20 -stepSize 0.001 -lambda 0.1 -local true -split 4 -input sample_regression
+
+# RUNTIME
+SELF_JAR=../target/flexion-0.1-SNAPSHOT-shaded.jar
+
+LOGGING_CONFIG='-Djava.util.logging.config.class=org.apache.reef.util.logging.Config'
+
+CLASSPATH=$YARN_HOME/share/hadoop/common/*:$YARN_HOME/share/hadoop/common/lib/*:$YARN_HOME/share/hadoop/yarn/*:$YARN_HOME/share/hadoop/hdfs/*:$YARN_HOME/share/hadoop/mapreduce/lib/*:$YARN_HOME/share/hadoop/mapreduce/*
+
+YARN_CONF_DIR=$YARN_HOME/etc/hadoop
+
+ALG=edu.snu.reef.flexion.examples.ml.algorithms.regression.LinearRegREEF
+
+CMD="java -cp $YARN_CONF_DIR:$SELF_JAR:$CLASSPATH $LOCAL_RUNTIME_TMP $LOGGING_CONFIG $ALG $*"
+echo $CMD
+$CMD # 2> /dev/null