Fixing workflow

sys-bio · Feb 9, 2024 · 98e0fdc · 98e0fdc
1 parent 4691f39
commit 98e0fdc
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Showing 2 changed files with 3 additions and 2 deletions.
diff --git a/.github/workflows/python_tests.yml b/.github/workflows/python_tests.yml
@@ -27,6 +27,8 @@ jobs:
     - name: Install pytest
       run: |
         pip install pytest
+    - name: Add project root to PYTHONPATH
+      run: echo "PYTHONPATH=${{ github.workspace }}" >> $GITHUB_ENV
     - name: Run tests
       run: |
         pytest tests/test_analyzer.py

diff --git a/ratesb_python/common/analyzer.py b/ratesb_python/common/analyzer.py
@@ -3,14 +3,13 @@
 import sys
 import os
 current_dir = os.path.abspath(os.path.dirname(__file__))
-sys.path.append(current_dir)
 
 from custom_classifier import _CustomClassifier
 # from SBMLKinetics.common.simple_sbml import SimpleSBML
 # from SBMLKinetics.common.reaction import Reaction
 from typing import List, Dict, Optional
 from SBMLKinetics.common.simple_sbml import SimpleSBML
-import util
+from common import util
 from results import Results
 
 import antimony