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CLIMB DIY
You have strictly 15 minutes, and we don't expect you to finish the whole track!
✅ Create a directory called id
inside the course
directory that you created yesterday in your home. If you didn't create it there, make a new directory course
in your home first.
✅ Using nano, create a text file called myself.tsv
, placed in the id
directory you just made, where to put these data separated by a tab:
- Surname
- Name
- Research area
✅ Locate a file called vir_cds_from_genomic.fna
.
Copy it in the course
directory calling it cds.fa
.
✅ Calculate how many sequences are contained in the cds.fa
file you just copied,
and store (redirect) them in a file called cds_counts.txt
(always in the course
directory).
(optional) Try calculating the number of nucleotides contained in the file cds.fa
, storing (redirecting) the output in a file called cds_total.txt
(always in the course
directory).
· Bioinformatics at the Command Line - Andrea Telatin, 2017-2020
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