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[Bakta] update to latest version full and light db (#740) build-documentation #93: Commit 44bd5f8 pushed by Michal-Babins
February 11, 2025 14:44 33s main
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February 11, 2025 14:44 33s
[Read_Screen] BUG fix $ to ~ reference for workflow series (#754) build-documentation #92: Commit 0c296e7 pushed by sage-wright
February 7, 2025 21:44 35s main
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February 7, 2025 21:44 35s
[Merlin_magic; Sonneityping] harden workflow against failures due to … build-documentation #91: Commit 0f41d6b pushed by sage-wright
February 7, 2025 21:20 31s main
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February 7, 2025 21:20 31s
[Read_Screen] Comprehensively run QC checks regardless of failure sta… build-documentation #90: Commit 323d16b pushed by sage-wright
February 6, 2025 18:44 35s main
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February 6, 2025 18:44 35s
[Augur] Fix issue with empty clades.tsv file in augur_clades task (#742) build-documentation #89: Commit 6adc4f9 pushed by Michal-Babins
February 6, 2025 18:43 32s main
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February 6, 2025 18:43 32s
[BaseSpace_Fetch] add --retry to prevent timeouts/failures (#717) build-documentation #88: Commit ec4492e pushed by Michal-Babins
February 6, 2025 18:32 31s main
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February 6, 2025 18:32 31s
[NCBI Datasets] Add ability to download from ncbi viral datasets (#748) build-documentation #87: Commit 3345599 pushed by sage-wright
February 5, 2025 21:42 32s main
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February 5, 2025 21:42 32s
[Snippy_Streamline] when include_gbff is true, use the GBFF file as… build-documentation #86: Commit b4a4057 pushed by Michal-Babins
February 5, 2025 21:16 30s main
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February 5, 2025 21:16 30s
[Tiptoft] Deprecate Tiptoft (#739) build-documentation #85: Commit 9839c78 pushed by sage-wright
February 5, 2025 19:33 38s main
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February 5, 2025 19:33 38s
[RASUSA] update from 0.7.0 -> 2.1.0 (#731) build-documentation #84: Commit 5a7c9ab pushed by sage-wright
January 29, 2025 14:26 33s main
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January 29, 2025 14:26 33s
[Documentation - Freyja] Update and revamp documentation to focus on … build-documentation #83: Commit 4f9bb14 pushed by sage-wright
January 27, 2025 14:25 34s main
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January 27, 2025 14:25 34s
[Kraken2] Update Krona to be compatible with viral data (#709) build-documentation #82: Commit 6a8bd27 pushed by Michal-Babins
January 24, 2025 19:56 40s main
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January 24, 2025 19:56 40s
[Snippy Variants] Preserve current memory allocation & add error hand… build-documentation #81: Commit 99fc2e1 pushed by Michal-Babins
January 24, 2025 19:41 32s main
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January 24, 2025 19:41 32s
[Clair3_Variants] Clair3_Variants_ONT_PHB workflow (#708) build-documentation #80: Commit 087e619 pushed by sage-wright
January 24, 2025 15:20 29s main
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January 24, 2025 15:20 29s
[Reorder Matrix] Changed output file name to more general {cluster}_d… build-documentation #79: Commit 5cb819b pushed by sage-wright
January 24, 2025 15:12 33s main
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January 24, 2025 15:12 33s
[Resource optimization] Set default Prokka resources to 4 CPUs and 16… build-documentation #78: Commit 768c5cb pushed by Michal-Babins
January 17, 2025 18:52 32s main
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January 17, 2025 18:52 32s
[Ivar Variants] Refactor to succeed with message when no variants fou… build-documentation #77: Commit e4b30bc pushed by sage-wright
January 17, 2025 18:39 34s main
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January 17, 2025 18:39 34s
[hicap] expose optional parameters (#724) build-documentation #76: Commit 204aff5 pushed by Michal-Babins
January 17, 2025 18:25 38s main
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January 17, 2025 18:25 38s
[srst2_vibrio, merlin_magic] Removed instances of srst2_ from inputs … build-documentation #75: Commit 2a8c304 pushed by sage-wright
January 16, 2025 20:46 30s main
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January 16, 2025 20:46 30s
[Documentation] fix broken links, update syntax, improvements to thei… build-documentation #74: Commit da2c218 pushed by Michal-Babins
January 16, 2025 20:33 36s main
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January 16, 2025 20:33 36s
[SRA-Fetch] query and report PHB version (#718) build-documentation #73: Commit dcca873 pushed by Michal-Babins
January 16, 2025 18:39 38s main
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January 16, 2025 18:39 38s
[Documentation] Adding philosophy of workflow failures page (#725) build-documentation #72: Commit f1d2721 pushed by sage-wright
January 16, 2025 15:59 33s main
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January 16, 2025 15:59 33s
[Documentation] SC2 Wastewater metadata formatter (#721) build-documentation #71: Commit c6d238b pushed by sage-wright
January 15, 2025 16:22 32s main
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January 15, 2025 16:22 32s
[Documentation] update docs for srr fetch wf (#719) build-documentation #70: Commit 69223ca pushed by sage-wright
January 14, 2025 17:36 37s main
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January 14, 2025 17:36 37s
[Read_Screen] skip_screen actually skips the screen (#699) build-documentation #69: Commit d980911 pushed by Michal-Babins
January 14, 2025 17:29 2m 54s main
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January 14, 2025 17:29 2m 54s