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@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain. (thanks to Tony Boyles)

If you would like to create a new project, please complete this form logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

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  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 20 16

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    35 42

Repositories

Showing 10 of 425 repositories
  • phoenix Public

    🔥🐦🔥PHoeNIx: a platform agnostic pipeline for healthcare-associated and antimicrobial resistant pathogens

    CDCgov/phoenix’s past year of commit activity
    Python 62 Apache-2.0 19 14 1 Updated Jan 27, 2025
  • CDCgov/NEDSS-Modernization’s past year of commit activity
    Java 19 3 0 5 Updated Jan 27, 2025
  • eMKF Public
    CDCgov/eMKF’s past year of commit activity
    SAS 2 Apache-2.0 2 0 0 Updated Jan 26, 2025
  • Opioid_SUD_MHI_MedCodes Public

    Code to flag ICD-10-CM codes related to opioid involvement, substance use disorder, and mental health issues in structured hospital data

    CDCgov/Opioid_SUD_MHI_MedCodes’s past year of commit activity
    Python 6 3 0 0 Updated Jan 26, 2025
  • ixa Public
    CDCgov/ixa’s past year of commit activity
    Rust 13 Apache-2.0 1 21 4 Updated Jan 26, 2025
  • prime-simplereport Public

    SimpleReport is a fast, free, and easy way for COVID-19 testing facilities to report results to public health departments.

    CDCgov/prime-simplereport’s past year of commit activity
    Java 59 CC0-1.0 55 258 15 Updated Jan 26, 2025
  • prime-reportstream Public

    ReportStream is a public intermediary tool for delivery of data between different parts of the healthcare ecosystem.

    CDCgov/prime-reportstream’s past year of commit activity
    Kotlin 76 CC0-1.0 41 1,269 152 Updated Jan 26, 2025
  • CDCgov/ixa-epi-isolation’s past year of commit activity
    Rust 1 Apache-2.0 1 0 6 Updated Jan 26, 2025
  • reportstream-sftp-ingestion Public

    Allow healthcare partners use SFTP to send messages to CDC ReportStream.

    CDCgov/reportstream-sftp-ingestion’s past year of commit activity
    Go 5 Apache-2.0 3 0 1 Updated Jan 26, 2025
  • NEDSS-DataIngestion Public

    Data Ingestion for Modernization of NEDSS Project by Enquizit

    CDCgov/NEDSS-DataIngestion’s past year of commit activity
    Java 6 Apache-2.0 3 0 7 Updated Jan 25, 2025

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